Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGATCAGGAGCCT
....(((((((.(((((((...&)))))))..))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047424971
GeneSymbolHSPA12A
Binding site4449,4466
Score0.923
Seed0
Au0.426
Energy-23.0
Binding len17
Me-12.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure