Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCGAGGCCTCCGCCTCAGTGGTCCTTGGGAGGGAGTCAGTGA
((((((((((((((((((....&.)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001300973
GeneSymbolANKRD42
Binding site507,550
Score0.923
Seed1
Au0.382
Energy-28.2
Binding len20
Me-3.938
Phylopstem-0.041173944444444444
Phylopflank0.06664357125
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure