Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATACAACTGTTTTTGCAAA
((((((..(((((((((.(((&))).)))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424971
GeneSymbolHSPA12A
Binding site5259,5281
Score0.846
Seed0
Au0.574
Energy-20.7
Binding len22
Me-7.795
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure