Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGTGTTGGCAGATAGGTG
(((((((..(((.(((((((((&))))))))).)))..))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047424972
GeneSymbolHSPA12A
Binding site4357,4383
Score0.923
Seed1
Au0.603
Energy-19.1
Binding len26
Me-8.597
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure