Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTTTAAAGATTGTATGTCAGTGTA
((((((((((((((.(......&.).)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001300985
GeneSymbolPTBP2
Binding site9721,9747
Score0.846
Seed1
Au0.706
Energy-18.0
Binding len19
Me-4.673
Phylopstem0.28697305333333323
Phylopflank0.22275449999999994
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end1
Position3UTR
2D Structure