Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTCCCAGAGGCTGGCAGCCAGTGA
((((((((((((((((((((((&))))...))))))))..)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301007
GeneSymbolAMOTL1
Binding site6396,6425
Score0.846
Seed1
Au0.471
Energy-28.5
Binding len29
Me-3.938
Phylopstem-0.07787586892857143
Phylopflank-0.11985864650000003
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure