Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCGACGGCAGCTTCAGCAT
.(((((((((.((((...(((&)))..)))).))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047424981
GeneSymbolSGMS1
Binding site13514,13537
Score0.846
Seed1
Au0.441
Energy-19.8
Binding len23
Me-6.851
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure