Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTATTTCAAGGTCTGCCGGGA
.(((((((.((...((((((((&))))))))......)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301026
GeneSymbolTJP1
Binding site4953,4978
Score0.846
Seed1
Au0.544
Energy-19.0
Binding len25
Me-10.342
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure