Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCAGCTGTGCCTAGGG
.(((((((((...(((((((((&)))))))))..)))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301029
GeneSymbolUSP28
Binding site2823,2845
Score1.0
Seed1
Au0.515
Energy-22.0
Binding len22
Me-11.254
Phylopstem3.7002847777777776
Phylopflank3.40314511625
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure