Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATGCTATTTTTGTATGCCAA
...((((((((((.((((..((&))..))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301032
GeneSymbolSLC24A1
Binding site4568,4589
Score0.846
Seed0
Au0.632
Energy-17.4
Binding len21
Me-7.371
Phylopstem0.29332494000000003
Phylopflank0.280941695
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure