Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAATGGATGTCCTCTTTGTAGCCAT
...(((((((.((((((((...&)))))))).))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301042
GeneSymbolC1orf54
Binding site12,42
Score0.846
Seed0
Au0.529
Energy-18.1
Binding len30
Me-9.339
Phylopstem1.3101035
Phylopflank0.906524015
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
Position5UTR
2D Structure