Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTACTGTATATTACAGATATTTGTCATGCTGGGA
.(((((((((((((((((....&)))))).....................))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301043
GeneSymbolCADM1
Binding site2571,2611
Score0.846
Seed1
Au0.632
Energy-15.8
Binding len40
Me-3.793
Phylopstem-0.18806411282051286
Phylopflank-0.41973417
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure