Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTACTGTATATTACAGATATTTGTCATGCTGGGA
.(((((((((((((((((....&)))))).....................))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301045
GeneSymbolCADM1
Binding site2487,2527
Score0.923
Seed1
Au0.632
Energy-15.8
Binding len40
Me-3.793
Phylopstem0.1806328769230769
Phylopflank-0.2665130975000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure