Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTACATAAAATGCTTATGGTG
(((.(((((...((((((((((&))))))))))...)))))...))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301072
GeneSymbolMAP3K4
Binding site2238,2263
Score0.923
Seed0
Au0.632
Energy-17.5
Binding len25
Me-14.384
Phylopstem2.0229918000000002
Phylopflank5.214876275
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure