Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCCAGGAGGGAAATAATGGATATTGCCAA
...(((((((((((((((((((&))))))))))))))).............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301089
GeneSymbolSNX19
Binding site3557,3590
Score1.0
Seed0
Au0.544
Energy-29.0
Binding len33
Me-6.515
Phylopstem-0.031239318749999988
Phylopflank0.020522283749999978
Longest consecutive pairings15
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure