Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCATTAGAGTCCCCAGAAAGGAATGCAGCCTTGCTGGCACCTTTTTAGCCCAGTGA
((((((((((((((((((....&.))))))))))).........................))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301134
GeneSymbolMTERF1
Binding site1540,1599
Score0.846
Seed1
Au0.529
Energy-25.8
Binding len46
Me-3.938
Phylopstem0.056126539545454546
Phylopflank0.17377183762499998
Longest consecutive pairings11
Position of longest consecutive pairings34
Pairings in 3prime end4
Position3UTR
2D Structure