Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACTTTAGTGTGCCAGA
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301138
GeneSymbolVPS39
Binding site629,645
Score0.923
Seed1
Au0.5
Energy-16.5
Binding len11
Me-11.418
Phylopstem-0.2595008222222222
Phylopflank-0.18532126912499997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure