Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GACCTGCCATGTGTGCCC
....((((((((..((((.((.&)).))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301138
GeneSymbolVPS39
Binding site4589,4607
Score0.821
Seed0
Au0.426
Energy-15.4
Binding len18
Me-11.693
Phylopstem4.832854
Phylopflank3.4573326303750003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure