Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCCGGAAGTGGAGTCTCTGC
((..((((((((((((((.(((&))))))))))).))))))..)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301138
GeneSymbolVPS39
Binding site1878,1901
Score0.923
Seed0
Au0.529
Energy-24.1
Binding len23
Me-8.527
Phylopstem0.26146785333333333
Phylopflank0.874529935
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end7
PositionCDS
2D Structure