Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGAGAAGGCTGGAGA
.....((.(((((((((((..&))).)))))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001301138
GeneSymbolVPS39
Binding site4768,4784
Score0.846
Seed0
Au0.515
Energy-22.1
Binding len16
Me-15.979
Phylopstem-0.5163583166666665
Phylopflank-0.27658410249999993
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure