Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATTCAGACTCAGCGAGCCGGTA
.((((((((((.(((((((...&)))))))...)).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301140
GeneSymbolISCU
Binding site634,656
Score0.923
Seed1
Au0.515
Energy-21.2
Binding len22
Me-7.14
Phylopstem-0.490435090909091
Phylopflank-0.0114440625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure