Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCATTGACTGCTAGGA
.(((((((..(((((((((...&)))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301161
GeneSymbolCDHR3
Binding site2799,2818
Score0.827
Seed1
Au0.632
Energy-20.8
Binding len19
Me-6.092
Phylopstem-0.6162755555555556
Phylopflank-0.18893083625000004
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure