Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGGGAAACATTGGCTGGGGGCACGGA
..(((((((((((((((((((.&))))))))))...........)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301167
GeneSymbolCLEC5A
Binding site1673,1705
Score0.808
Seed1
Au0.5
Energy-22.9
Binding len32
Me-4.957
Phylopstem-0.18561898387096773
Phylopflank-0.19621210875
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
Position3UTR
2D Structure