Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGGTGGGAGTGGGG
..((.((((((((((((((...&)))))))).)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301167
GeneSymbolCLEC5A
Binding site2587,2606
Score0.923
Seed0
Au0.485
Energy-21.3
Binding len19
Me-9.076
Phylopstem-0.08519680866666661
Phylopflank-0.27578674687499993
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure