Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCCAAGGAGCCTGG
..(.((((((((...((((...&)))).)))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301167
GeneSymbolCLEC5A
Binding site1593,1609
Score0.923
Seed0
Au0.471
Energy-20.6
Binding len16
Me-10.87
Phylopstem0.2202238875
Phylopflank-0.21117928000000005
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end4
Position3UTR
2D Structure