Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAGGGGGCGGCAGCGG
(.(((((((((((((((((...&))))))))))))))..))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301169
GeneSymbolSHF
Binding site127,149
Score0.846
Seed1
Au0.206
Energy-28.3
Binding len22
Me-5.101
Phylopstem0.7574047684210526
Phylopflank0.49830222999999996
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure