Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCAGGAGCAGCCAGGG
.((((((......((((((...&))))))......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301170
GeneSymbolSHF
Binding site855,874
Score0.808
Seed1
Au0.456
Energy-16.9
Binding len19
Me-15.867
Phylopstem5.574056666666667
Phylopflank5.0408332025
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure