Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCATATTGTAATGTTAGGTG
((((((((((((((((.((...&)))))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301175
GeneSymbolUSP30
Binding site2339,2359
Score0.846
Seed1
Au0.603
Energy-17.9
Binding len20
Me-3.938
Phylopstem-0.3301901705882353
Phylopflank0.5060935025
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure