Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGTACTCCAGGGATCAGAAGGAGCCC
....((((((((((((((.((.&)))))))..............))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301175
GeneSymbolUSP30
Binding site782,813
Score0.846
Seed0
Au0.485
Energy-22.3
Binding len31
Me-9.547
Phylopstem1.3931254999999998
Phylopflank3.9545222349999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure