Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGAAAGGGAGCTGGA
..(((((((((((((.(((...&))).))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301175
GeneSymbolUSP30
Binding site17,36
Score0.846
Seed1
Au0.523
Energy-22.2
Binding len19
Me-5.19
Phylopstem-0.11923726428571424
Phylopflank-0.16106757711250003
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end4
Position5UTR
2D Structure