Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTGCTGGAGCTGCGGGAGATGCCAGGTG
(((((((((....(((((.(((&.))))))))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301202
GeneSymbolRASAL1
Binding site843,873
Score0.923
Seed1
Au0.324
Energy-21.3
Binding len23
Me-12.641
Phylopstem0.26073104444444445
Phylopflank-0.007308793750000014
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure