Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CGTGATGTGCTAGGC
.(((((((((..(((.......&)))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301228
GeneSymbolHMGB3
Binding site3048,3063
Score0.846
Seed1
Au0.485
Energy-15.3
Binding len15
Me-10.198
Phylopstem0.28429
Phylopflank-0.41130093475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure