Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTAGGCGGCCGGGAAGGAAGAAGCAATTCAGTCAGG
..(((((((((((((((((((.&)))).......))))))))))............))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301228
GeneSymbolHMGB3
Binding site223,262
Score0.846
Seed1
Au0.471
Energy-20.5
Binding len39
Me-4.957
Phylopstem5.9980779473684205
Phylopflank3.2087171735
Longest consecutive pairings10
Position of longest consecutive pairings18
Pairings in 3prime end7
Position5UTR
2D Structure