Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCAGGGAAGGGCCAA
...((((.(((((((.(((...&))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301228
GeneSymbolHMGB3
Binding site3175,3191
Score0.923
Seed0
Au0.529
Energy-20.4
Binding len16
Me-9.061
Phylopstem0.12977715714285715
Phylopflank-0.21694224050000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure