Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGCCCCGTGGGCTGTAGCAAGTGTGCCCAGGG
.((((((((((..(((......&.))).))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001301272
GeneSymbolMT1F
Binding site246,282
Score0.846
Seed1
Au0.382
Energy-16.7
Binding len17
Me-8.429
Phylopstem2.7023824545454542
Phylopflank1.39137698625
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end2
Position3UTR
2D Structure