Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAGCGCGAGAGGGCCTGGAGAGGGTGGGTGT
((((.((.(((((((((((...&.))))))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301685
GeneSymbolCCDC148
Binding site17,49
Score0.923
Seed0
Au0.368
Energy-25.6
Binding len20
Me-10.37
Phylopstem0.4463813636363636
Phylopflank0.08412482062499996
Longest consecutive pairings13
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure