Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAAACAAGGAGCCT
....((((((((..((((((((&))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001301875
GeneSymbolCCL28
Binding site2078,2098
Score0.923
Seed0
Au0.544
Energy-24.5
Binding len20
Me-11.693
Phylopstem-0.20818124999999993
Phylopflank0.25485840749999994
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure