Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTGAGGCAGGA
....(((((((((((((....&))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001301875
GeneSymbolCCL28
Binding site663,680
Score0.923
Seed0
Au0.456
Energy-22.4
Binding len17
Me-9.547
Phylopstem-0.13742712499999996
Phylopflank-0.046311107499999976
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure