Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCAGCACATGCCGGGA
.((((((((....((((.(...&).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001302371
GeneSymbolNBPF10
Binding site11634,11653
Score0.923
Seed1
Au0.544
Energy-17.4
Binding len19
Me-12.497
Phylopstem-0.00990578750000001
Phylopflank0.22325470749999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure