Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCAAAGATTCGAGCAATAGAAAAGTCTGTGGTGCCTTGGGTC
((((((((((((.(((((((((&))))))))).......................)))).))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001302378
GeneSymbolRBSN
Binding site875,923
Score0.923
Seed1
Au0.515
Energy-16.5
Binding len48
Me-5.227
Phylopstem-0.016187866666666665
Phylopflank0.03596181124999999
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure