Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTCCCAGCCTGCCAGGC
.(((((((......(((((...&)))))........))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001302632
GeneSymbolCAPNS1
Binding site1474,1495
Score0.846
Seed1
Au0.456
Energy-17.2
Binding len21
Me-14.41
Phylopstem0.5578784571428572
Phylopflank0.29504478416666663
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure