Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAAGCCCACCTGCGGCTGAGTTCAGAGGTGGGGCCTGTGC
(((.(((((((((((((((...&)))))))))..........................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001302643
GeneSymbolSLC17A9
Binding site3122,3168
Score0.923
Seed0
Au0.426
Energy-24.6
Binding len46
Me-6.97
Phylopstem-0.5864329926829268
Phylopflank-0.3615679937499999
Longest consecutive pairings9
Position of longest consecutive pairings37
Pairings in 3prime end5
Position3UTR
2D Structure