Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGAGAGGCATCATGGTGGCTTCCCTGCGCCCAGGAAGCCAT
...(((((((((((((((((..&))))))))))))............................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001302753
GeneSymbolCD40
Binding site1225,1271
Score0.923
Seed0
Au0.471
Energy-24.9
Binding len46
Me-6.515
Phylopstem-0.3368340755555555
Phylopflank-0.3542632575
Longest consecutive pairings12
Position of longest consecutive pairings34
Pairings in 3prime end6
Position3UTR
2D Structure