Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGGAGTGTGGCCACGTGG
((((((((.((((((((((...&))))))))).).))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001302753
GeneSymbolCD40
Binding site914,936
Score0.846
Seed1
Au0.353
Energy-24.4
Binding len22
Me-4.994
Phylopstem0.07737355454545455
Phylopflank1.3016040312500001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure