Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGTGGTGGTGTTGGGGTA
..(((((...(((.(((((((&))))).)).)))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001302753
GeneSymbolCD40
Binding site1161,1182
Score0.846
Seed0
Au0.5
Energy-21.6
Binding len21
Me-10.426
Phylopstem-0.18922181249999998
Phylopflank-0.1864943
Longest consecutive pairings5
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure