Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTATACATTTTTCTTTGTTTGATGTGCTGGGTG
(((((((((((((...(((...&.)))....))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001302999
GeneSymbolLIPI
Binding site114,149
Score0.923
Seed1
Au0.647
Energy-16.7
Binding len23
Me-5.763
Phylopstem0.5349002285714286
Phylopflank0.31978976175
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure