Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCGACTTCTCCATTATGGAAGGCTAAGGCCAT
...((((((((((((((((((.&))))))).............))))))....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001303107
GeneSymbolPGAP4
Binding site3804,3840
Score0.846
Seed0
Au0.471
Energy-21.1
Binding len36
Me-6.515
Phylopstem3.103059950571428
Phylopflank2.982349990875
Longest consecutive pairings7
Position of longest consecutive pairings29
Pairings in 3prime end7
Position3UTR
2D Structure