Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACATCTCTGCCAGGA
.(((((((....(((((.....&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303110
GeneSymbolCOL4A1
Binding site1329,1345
Score0.846
Seed1
Au0.426
Energy-16.2
Binding len16
Me-12.264
Phylopstem1.812037142857143
Phylopflank2.0092988162499994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure