Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACCTGGATTTCAGGGGATGCCAGGG
.(((((((..(..((.((((((&.))))))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303110
GeneSymbolCOL4A1
Binding site922,949
Score0.827
Seed1
Au0.441
Energy-19.3
Binding len22
Me-10.961
Phylopstem1.8645930142857148
Phylopflank1.6831695825
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure