Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTCCATCCACGTTGGCCAGGC
.((((((...((((((.(((..&.))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001303114
GeneSymbolTUBA1C
Binding site250,273
Score0.846
Seed1
Au0.426
Energy-18.4
Binding len18
Me-8.406
Phylopstem4.059510016666667
Phylopflank3.8860010962499993
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure